De novo transcriptome assembly of Schizaphis gramium Biotype I feeding on wheat

Transcriptome was generated from pooled adult aphids that were fed on wheat plants containing the Dn4 and DN7 resistance gene as well as Yuma plants containing no resistant genes (Dn0). The assembly was generated using Trinity. All assembled transcripts, including those that were not predicted to encode ORFs, are included along with their corresponding functional annotations from Trinotate.

Data and Resources

De novo transcriptome assembly of Schizaphis...fasta
Reads were assembled using Trinity version 2.3.2. All transcripts greater...
Explore
- More information
- Go to resource
Filtered Transcriptome Assembly of Schizaphis graminumTXT
Only transcripts with transcripts per million mapped reads values (TPM)...
Explore
- More information
- Go to resource
Trinotate results for Schizaphis graminum...XLS
Trinotate was used to obtain highest scoring blastp matches to annotated...
Explore
- Preview
- Download
Protein coding translations of Schizaphis...TXT
TransDecoder was used to predict open reading frames in the final...
Explore
- More information
- Go to resource

Additional Info

Field	Value
Source
Version
Author
Author Email
Maintainer
Maintainer Email
Shared (this field will be removed in the future)	Open
IB1 Sensitivity Class
IB1 Trust Framework
IB1 Dataset Assurance
IB1 Trust Framework
GUID	7c085abf-7fb7-4cbf-a853-e2735d6ba1f3
Language
dcat_modified	2022-09-28
dcat_publisher_name	Agricultural Research Service
harvest_object_id	63701663-91fe-4fd5-a890-79a650e56bbd
harvest_source_id	2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_title	USDA Open Data Catalog