gbif.range - An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper

Although species range may be obtained using expert maps or modeling methods, expert data is often species-limited and statistical models need more technical expertise as well as many species observations. When unavailable, such information may be extracted from the Global Biodiversity Information facility (GBIF), the largest public data repository inventorying georeferenced species observations worldwide. However, retrieving GBIF records at large scale may be tedious if users are unaware of specific tools and functions that need to be employed. Here we present gbif.range, an R library that contains automated methods to generate species range maps from scratch using in-house ecoregions shapefiles and an easy-to-use GBIF download wrapper. Finally, this library also offers a set of additional very useful parameters and functions for large GBIF datasets (generate doi, extract GBIF taxonomy, records filtering...). gbif.range R project

Data and Resources

Additional Info

Field Value
Source
Version 0.2
Author [{"given_name": "Yohann", "name": "Chauvier", "email": "[email protected]", "data_credit": ["software", "curation", "collection", "validation"], "identifier": "0000-0001-9399-3192", "affiliation": "Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Unit of Land Change Science"}, {"given_name": "Oskar", "name": "Hagen", "email": "[email protected]", "data_credit": ["software", "curation", "collection", "validation"], "identifier": "0000-0002-7931-6571", "affiliation": "WSL"}, {"given_name": "Camille", "name": "Albouy", "email": "[email protected]", "data_credit": ["software", "validation", "curation"], "identifier": "0000-0003-1629-2389", "affiliation": "ETH"}, {"given_name": "Patrice", "name": "Descombes", "email": "[email protected]", "data_credit": ["software", "validation"], "identifier": "0000-0002-3760-9907", "affiliation": "ETHZ | Department of Environmental Systems Science | Institute of Terrestrial Ecosystems | Landscape Ecology"}, {"given_name": "Fabian", "name": "Fopp", "email": "[email protected]", "data_credit": ["software"], "identifier": "0000-0003-0648-8484", "affiliation": "WSL"}, {"given_name": "Michael P.", "name": "Nobis", "email": "[email protected]", "data_credit": ["validation"], "identifier": "0000-0003-3285-1590", "affiliation": "WSL"}, {"given_name": "Philipp", "name": "Brun", "email": "[email protected]", "data_credit": ["software"], "identifier": "https://orcid.org/0000-0002-2750-9793", "affiliation": "Swiss Federal Institute for Forest, Snow and Landscape Research WSL "}, {"given_name": "Lisha", "name": "Lyu", "email": "[email protected]", "data_credit": ["validation"], "identifier": "0000-0001-7855-8109", "affiliation": "ETH Z\u00fcrich"}, {"given_name": "Katalin", "name": "Csill\u00e9ry", "email": "[email protected]", "data_credit": ["supervision"], "identifier": "0000-0003-0039-9296", "affiliation": "Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Unit of Land Change Science"}, {"given_name": "Lo\u00efc", "name": "Pellissier", "email": "[email protected]", "data_credit": ["supervision"], "identifier": "0000-0002-2289-8259", "affiliation": "Ecosystems and Landscape Evolution, Dep. of Environmental Systems Science, ETH Zurich"}]
Author Email
Maintainer {"affiliation": "Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Unit of Biodiversity and Conservation Biology", "email": "[email protected]", "given_name": "Yohann", "identifier": "0000-0001-9399-3192", "name": "Chauvier"}
Maintainer Email
Shared (this field will be removed in the future) Open
IB1 Sensitivity Class
IB1 Trust Framework
IB1 Dataset Assurance
IB1 Trust Framework
harvest_object_id 068d8a67-d173-415e-a41b-6dc49abb6749
harvest_source_id 8fc5dcf9-738c-468f-985c-d55347a92f88
harvest_source_title EnviDat