Data from: Genotypic characterization of the U.S. peanut core collection

This collection contains supplementary data for the manuscript "Genotypic characterization of the U.S. Peanut Core Collection", which describes genotyping results for the USDA peanut core collection. Each accession was genotyped with the Arachis_Axiom2 SNP array, yielding 14,430 high-quality, informative SNPs across the collection. Additionally, a subset of the core collection was replicated genotyped in replicate, using between two and five seeds per accession to assess heterogeneity within an accession. Supplementary files include: descriptive information about the genotyped accessions, SNP genotype calls in several formats, a phylogenetic tree calculated from the genotype data, Structure analysis, PCA analysis, and comparisons with the diploid progenitors. This research was co-funded by the National Institute of Food and Agriculture and the National Peanut Board.

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Shared (this field will be removed in the future) Open
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GUID c74db002-cb47-47fd-b8b8-ced13ee0e5bf
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dcat_modified 2021-02-25
dcat_publisher_name Agricultural Research Service
harvest_object_id a0598ea2-9582-4599-b697-d0c01a9b773e
harvest_source_id 2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_title USDA Open Data Catalog